Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015888041.1_cds_XP_016442572.1_37822
CDS Infomation

[gene=LOC107767983] [db_xref=GeneID:107767983] [protein=primary amine oxidase-like] [protein_id=XP_016442572.1] [location=complement(join(84238..84363,84842..84923,85117..85385,85884..86024,87214..87399,87723..87959,88062..88277,88366..88696,88810..88922,89239..89544,89631..89740,91083..91305))] [gbkey=CDS]
Sequence

ATGGCCTCAACTCAGGAAAAGGCGACGGTTTCTTCCCCTTCACGAAATGCTTCCGCCGCT
CAGTTTTCGTCTGAATGGACTGCCGCCGGAACCGTAGCTGAAATTTCCGATCGTTCCTCT
ACCACCAGATCGGCGGCCAACGCCAAAACCACTGCCACTGCTGCTGTTGCTGTGATCGAC
TCCATTGATCGTCCTTCTCTGCCAAATCCTCCCGCCGTTAAAGGGCTGCCTACCTTGTTG
AGGGCTCAAAGTCACCATCCCTTGGACCCCTTAACTGCTGCTGAAATTGCCGTGGCTGTT
GCAACTGTCAGGGCAGCTGGCAGTACTCCTGAGGTGAGAGATAGCATGCGTTTTGTCGAG
GCTGTTTTGGTGGAACCAGACAAGAGTGTGATTGCTTTAGCTGATGCATACTTTTTCCCT
CCTTTCCAACCATCTTTGTTGCCAAGAACGAAAGGTGGGCCTGTAATTCCTAGTAAACTT
CCTCCAAGGAAGGCTAGACTAATTGTTTATAATAAGAAATCAAATGAGACCAGCATATGG
GTTGTTGAGCTCTCGGAGGTTCATGCTGTGACTCGAGGAGGCCACCACCGCGGCAAAGTC
ATTTCATCTCAGGTTGTGCCTGATATACAGCCTCCAATGGACGCTGCTGAATATGCTGAA
TGTGAAGCTGTTGTGAAGGATTTCCCTCCTTTTCGTGATGCAATGAAGAAGAGAGGAATC
GATGATATGGAACTTGTGATGGTCGATGCCTGGTGTGCAGGTTACTTCAGTGAGGCTGAT
GCACCTAACCGCCGTCTAGGAAAACCTCTAATCTTTTGCAGAACTGAAAGCGACTGTCCA
ATGGAAAATGGCTATGCTCGACCAGTTGAAGGAATTCATATACTGGTTGATATGCAGAAT
ATGGTTGTGATAGAGTTTGAAGATCGTAAAGTGGTTCCGTTACCACCAGCTGATCCATTG
AGAAATTACACTCCTGGTGAAACGAGAGGAGGGGTTGACAGAAGTGATGTTAAACCTCTT
CTTATAAGTCAGCCTGAAGGTCCTAGCTTCCGTGTCAGTGGGCACTTTGTTGAATGGCAG
AAGTGGAACTTTCGTATTGGTTTTACCCCCAGGGAGGGTCTGGTTATCTATTCTGTTGCA
TATGTTGATGGTAGCAGAGGTCGTAGACCTGTTGCGCATAGGCTGAGCTTCATTGAAATG
GTAGTCCCCTATGGGGATCCAAATGAGCCACATTACAGGAAAAATGCTTTTGATGCAGGG
GAAGACGGGCTTGGTAAAAATGCACATTCCTTAAAGAAGGGTTGTGATTGCTTAGGCTAT
ATTAAGTATTTCGATGCGCATTTTACAAACTTCACGGGTGGTGTTGAGACAATCGAAAAT
TGTGTCTGCCTACATGAGGAGGATCATGGAATCTTATGGAAGCATCAAGATTGGAGAACA
GGTTTAGCTGAAGTACGACGATCGCGACGGCTAACAGTGTCTTTCATCTGTACTGTTGCA
AACTATGAATATGGATTTTACTGGCACTTTTATCAGGATGGGAAAATCGAGGCTGAAGTT
AAGCTGACTGGAATTCTCAGCTTAGGTGCTCTTCTACCTGGGGAAGTTCGAAAATATGGG
ACAACTATTGCACCTGGCTTGTATGCTCCTGTACATCAGCACTTCTTTGTGGCTCGCATG
GATATGGCTGTTGATTGCAAACCAGGGGAAGCACATAATCAGGTGGTTGAAGTAAATGCA
AGAGTTGAGCCACCAGGAGAAAATAATGTTCACAATAATGCGTTTTATGCTGAAGAGAGA
TTGCTTAGAACTGAATTGGAAGCAATGCGTGATTGTAATCCTCTAACTGCTCGCCATTGG
ATTATCCGGAATACAAGAACAGTCAATCGCACGGGGCAGTTAACTGGTTACAAGCTAGTA
CCAGGTACAAACTGTCTGCCACTAGCTGGATCAGAGGCAAAATTCTTGAGAAGAGCTGCT
TTCTTAAAGCATAATCTTTGGGTCACCCCTTACTGTGGTGATGAGATGTTTCCTGGAGGA
GAATTTCCTAATCAAAATCCTCGTGTTGGTGAGGGATTGGCTACTTGGGTTAAGCAGAAT
CGATCCCTGGAAGAAACACAGATAGTTCTTTGGTATGTTTTTGGACTTATACATGTTCCG
CGCCTAGAAGACTGGCCTGTTATGCCTGTGGAGCACATTGGTTTTATGCTGCAGCCTCAT
GGGTTCTTCAATTGCTCCCCAGCTGTTGATGTTCCTCCCAGCACAGCTGACTCGGATATT
AAGGAAAACGGGGTAGTGACAAAGTCTTGCCACGACGGTGGTATAATGGCTAAGCTTTGA

Peptide Sequence

PEP ID

XP_016442572.1
PEP Infomation

PREDICTED: primary amine oxidase-like [Nicotiana tabacum]
Sequence

MASTQEKATVSSPSRNASAAQFSSEWTAAGTVAEISDRSSTTRSAANAKTTATAAVAVID
SIDRPSLPNPPAVKGLPTLLRAQSHHPLDPLTAAEIAVAVATVRAAGSTPEVRDSMRFVE
AVLVEPDKSVIALADAYFFPPFQPSLLPRTKGGPVIPSKLPPRKARLIVYNKKSNETSIW
VVELSEVHAVTRGGHHRGKVISSQVVPDIQPPMDAAEYAECEAVVKDFPPFRDAMKKRGI
DDMELVMVDAWCAGYFSEADAPNRRLGKPLIFCRTESDCPMENGYARPVEGIHILVDMQN
MVVIEFEDRKVVPLPPADPLRNYTPGETRGGVDRSDVKPLLISQPEGPSFRVSGHFVEWQ
KWNFRIGFTPREGLVIYSVAYVDGSRGRRPVAHRLSFIEMVVPYGDPNEPHYRKNAFDAG
EDGLGKNAHSLKKGCDCLGYIKYFDAHFTNFTGGVETIENCVCLHEEDHGILWKHQDWRT
GLAEVRRSRRLTVSFICTVANYEYGFYWHFYQDGKIEAEVKLTGILSLGALLPGEVRKYG
TTIAPGLYAPVHQHFFVARMDMAVDCKPGEAHNQVVEVNARVEPPGENNVHNNAFYAEER
LLRTELEAMRDCNPLTARHWIIRNTRTVNRTGQLTGYKLVPGTNCLPLAGSEAKFLRRAA
FLKHNLWVTPYCGDEMFPGGEFPNQNPRVGEGLATWVKQNRSLEETQIVLWYVFGLIHVP
RLEDWPVMPVEHIGFMLQPHGFFNCSPAVDVPPSTADSDIKENGVVTKSCHDGGIMAKL

Transcript Sequence

Gene sequence data has not been registered.